GoMiner: A Resource for Biological Interpretation of Genomic and Proteomic Data
Genome Biology,
Volume 4
Issue 4, April 2003
by Barry Zeeberg, Weimin Feng, Geoffrey Wang, May Wang, Anthony Fojo, Margot Sunshine, Sudarshan Narasimhan, David Kane, William Reinhold, Samir Lababidi, Kimberly Bussey, Joseph Riss, J. Carl Barrett and John WeinsteinAbstract: We have developed GoMiner, a program package that organizes lists of 'interesting' genes (for example,
under- and overexpressed genes from a microarray experiment) for biological interpretation in the context of the
Gene Ontology. GoMiner provides quantitative and statistical output files and two useful visualizations. The first
is a tree-like structure analogous to that in the AmiGO browser and the second is a compact, dynamically interactive
'directed acyclic graph'. Genes displayed in GoMiner are linked to major public bioinformatics resources.
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